1.790 Å
X-ray
2016-06-08
| Name: | Aurora kinase A |
|---|---|
| ID: | AURKA_HUMAN |
| AC: | O14965 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | 2.7.11.1 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 32.646 |
|---|---|
| Number of residues: | 27 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.834 | 391.500 |
| % Hydrophobic | % Polar |
|---|---|
| 50.86 | 49.14 |
| According to VolSite | |

| HET Code: | ADP |
|---|---|
| Formula: | C10H12N5O10P2 |
| Molecular weight: | 424.177 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 49.58 % |
| Polar Surface area: | 260.7 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 14 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 3 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| -33.1344 | 18.9342 | -21.3212 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C1' | CB | LEU- 139 | 4.27 | 0 | Hydrophobic |
| O1B | N | LYS- 143 | 2.84 | 162.25 | H-Bond (Protein Donor) |
| C5' | CG2 | VAL- 147 | 3.56 | 0 | Hydrophobic |
| O3B | NZ | LYS- 162 | 2.91 | 158.03 | H-Bond (Protein Donor) |
| O2A | NZ | LYS- 162 | 2.99 | 154.82 | H-Bond (Protein Donor) |
| O3B | NZ | LYS- 162 | 2.91 | 0 | Ionic (Protein Cationic) |
| O2A | NZ | LYS- 162 | 2.99 | 0 | Ionic (Protein Cationic) |
| N6 | O | GLU- 211 | 2.69 | 163.39 | H-Bond (Ligand Donor) |
| N1 | N | ALA- 213 | 2.9 | 171.89 | H-Bond (Protein Donor) |
| C2' | CG2 | THR- 217 | 4.05 | 0 | Hydrophobic |
| C2' | CD2 | LEU- 263 | 4.18 | 0 | Hydrophobic |