1.800 Å
X-ray
2015-10-27
| Name: | Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 |
|---|---|
| ID: | ENPP6_MOUSE |
| AC: | Q8BGN3 |
| Organism: | Mus musculus |
| Reign: | Eukaryota |
| TaxID: | 10090 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 20.142 |
|---|---|
| Number of residues: | 24 |
| Including | |
| Standard Amino Acids: | 21 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | ZN ZN |
| Ligandability | Volume (Å3) |
|---|---|
| 0.393 | 779.625 |
| % Hydrophobic | % Polar |
|---|---|
| 36.36 | 63.64 |
| According to VolSite | |

| HET Code: | PC |
|---|---|
| Formula: | C5H13NO4P |
| Molecular weight: | 182.135 g/mol |
| DrugBank ID: | DB03945 |
| Buried Surface Area: | 70.99 % |
| Polar Surface area: | 82.23 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 4 |
| H-Bond Donors: | 0 |
| Rings: | 0 |
| Aromatic rings: | 0 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 4 |
| X | Y | Z |
|---|---|---|
| 0.932545 | -1.59673 | -6.79309 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O4 | N | SER- 71 | 3 | 148.8 | H-Bond (Protein Donor) |
| O2 | OG | SER- 71 | 2.95 | 159.4 | H-Bond (Protein Donor) |
| C1 | CB | SER- 71 | 4.36 | 0 | Hydrophobic |
| O4 | ND2 | ASN- 92 | 2.79 | 157.69 | H-Bond (Protein Donor) |
| N1 | OE2 | GLU- 190 | 3.81 | 0 | Ionic (Ligand Cationic) |
| O1 | ZN | ZN- 508 | 2.1 | 0 | Metal Acceptor |
| O3 | ZN | ZN- 508 | 2.75 | 0 | Metal Acceptor |
| O3 | ZN | ZN- 509 | 1.96 | 0 | Metal Acceptor |