1.550 Å
X-ray
2015-09-22
| Name: | Succinyl-CoA:acetate CoA-transferase |
|---|---|
| ID: | SCACT_ACEAC |
| AC: | B3EY95 |
| Organism: | Acetobacter aceti |
| Reign: | Bacteria |
| TaxID: | 435 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 14.658 |
|---|---|
| Number of residues: | 54 |
| Including | |
| Standard Amino Acids: | 47 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 7 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.988 | 634.500 |
| % Hydrophobic | % Polar |
|---|---|
| 42.55 | 57.45 |
| According to VolSite | |

| HET Code: | 0T1 |
|---|---|
| Formula: | C22H34N7O16P3 |
| Molecular weight: | 745.464 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 45.01 % |
| Polar Surface area: | 387.31 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 20 |
| H-Bond Donors: | 5 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 4 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 18 |
| X | Y | Z |
|---|---|---|
| -6.63508 | 13.7097 | -25.8515 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C6P | CE1 | PHE- 92 | 3.88 | 0 | Hydrophobic |
| C1P | CG | GLN- 267 | 4.26 | 0 | Hydrophobic |
| C1P | CG | GLU- 294 | 3.86 | 0 | Hydrophobic |
| N6A | O | ILE- 364 | 2.79 | 136.44 | H-Bond (Ligand Donor) |
| CDP | CD1 | ILE- 364 | 4.11 | 0 | Hydrophobic |
| CEP | CD1 | ILE- 364 | 4.05 | 0 | Hydrophobic |
| C1B | CE | MET- 383 | 4.17 | 0 | Hydrophobic |
| C4B | SD | MET- 383 | 4.21 | 0 | Hydrophobic |
| CEP | CG | MET- 383 | 3.74 | 0 | Hydrophobic |
| O9P | ND2 | ASN- 384 | 2.83 | 166.97 | H-Bond (Protein Donor) |
| C2P | CB | SER- 389 | 4.46 | 0 | Hydrophobic |
| C1P | CD2 | PHE- 392 | 3.88 | 0 | Hydrophobic |
| O7A | NZ | LYS- 408 | 3.84 | 0 | Ionic (Protein Cationic) |
| O5P | O | HOH- 758 | 2.64 | 179.97 | H-Bond (Protein Donor) |
| O9P | O | HOH- 794 | 2.78 | 139.34 | H-Bond (Protein Donor) |
| N6A | O | HOH- 801 | 3.01 | 163.97 | H-Bond (Ligand Donor) |
| O5A | O | HOH- 843 | 3.08 | 179.97 | H-Bond (Protein Donor) |
| N4P | O | HOH- 923 | 2.83 | 156.8 | H-Bond (Ligand Donor) |