2.600 Å
X-ray
2015-09-07
Name: | L-glutamine synthetase |
---|---|
ID: | Q1QZR8_CHRSD |
AC: | Q1QZR8 |
Organism: | Chromohalobacter salexigens |
Reign: | Bacteria |
TaxID: | 290398 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
E | 79 % |
F | 21 % |
B-Factor: | 66.257 |
---|---|
Number of residues: | 29 |
Including | |
Standard Amino Acids: | 29 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.796 | 1491.750 |
% Hydrophobic | % Polar |
---|---|
25.34 | 74.66 |
According to VolSite |
HET Code: | ADP |
---|---|
Formula: | C10H12N5O10P2 |
Molecular weight: | 424.177 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 53.95 % |
Polar Surface area: | 260.7 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 14 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 3 |
Cationic atoms: | 0 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 6 |
X | Y | Z |
---|---|---|
-52.222 | -45.3014 | 28.7869 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O2B | NZ | LYS- 36 | 3.97 | 0 | Ionic (Protein Cationic) |
O2B | ND1 | HIS- 52 | 2.88 | 145.88 | H-Bond (Protein Donor) |
C1' | CB | ALA- 141 | 3.69 | 0 | Hydrophobic |
O3' | OE1 | GLU- 201 | 3.31 | 157.79 | H-Bond (Ligand Donor) |
O2' | N | CYS- 218 | 2.89 | 134.28 | H-Bond (Protein Donor) |
C1' | CB | CYS- 218 | 4 | 0 | Hydrophobic |
C1' | CB | HIS- 264 | 4.45 | 0 | Hydrophobic |
O5' | NH2 | ARG- 348 | 2.95 | 123.03 | H-Bond (Protein Donor) |