2.490 Å
X-ray
2015-07-15
| Name: | Uncharacterized protein |
|---|---|
| ID: | Q5WZW9_LEGPL |
| AC: | Q5WZW9 |
| Organism: | Legionella pneumophila |
| Reign: | Bacteria |
| TaxID: | 297245 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 90.694 |
|---|---|
| Number of residues: | 33 |
| Including | |
| Standard Amino Acids: | 31 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | MG MG |
| Ligandability | Volume (Å3) |
|---|---|
| 0.467 | 749.250 |
| % Hydrophobic | % Polar |
|---|---|
| 49.10 | 50.90 |
| According to VolSite | |

| HET Code: | ANP |
|---|---|
| Formula: | C10H13N6O12P3 |
| Molecular weight: | 502.164 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 55.05 % |
| Polar Surface area: | 322.68 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 16 |
| H-Bond Donors: | 4 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 4 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 8 |
| X | Y | Z |
|---|---|---|
| -34.0141 | -31.3449 | 9.87474 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C1' | CG2 | ILE- 79 | 4.03 | 0 | Hydrophobic |
| C4' | CG2 | ILE- 79 | 3.38 | 0 | Hydrophobic |
| C5' | CG | GLN- 89 | 4.17 | 0 | Hydrophobic |
| C4' | CZ | PHE- 102 | 4.4 | 0 | Hydrophobic |
| C1' | CE1 | PHE- 102 | 3.64 | 0 | Hydrophobic |
| DuAr | DuAr | PHE- 102 | 3.95 | 0 | Aromatic Face/Face |
| O1B | NZ | LYS- 104 | 3.38 | 150.99 | H-Bond (Protein Donor) |
| O2A | NZ | LYS- 104 | 2.84 | 154.41 | H-Bond (Protein Donor) |
| O1B | NZ | LYS- 104 | 3.38 | 0 | Ionic (Protein Cationic) |
| O1A | NZ | LYS- 104 | 3.76 | 0 | Ionic (Protein Cationic) |
| O2A | NZ | LYS- 104 | 2.84 | 0 | Ionic (Protein Cationic) |
| N6 | O | THR- 146 | 2.85 | 138.45 | H-Bond (Ligand Donor) |
| N1 | N | ILE- 148 | 2.7 | 165.7 | H-Bond (Protein Donor) |
| O2' | SD | MET- 202 | 2.76 | 158.84 | Weak HBond LIG |
| C2' | SD | MET- 202 | 3.77 | 0 | Hydrophobic |
| C2' | CG2 | VAL- 212 | 4.48 | 0 | Hydrophobic |
| O2B | MG | MG- 502 | 2.02 | 0 | Metal Acceptor |
| O3A | MG | MG- 502 | 2.76 | 0 | Metal Acceptor |