2.110 Å
X-ray
2015-06-03
| Name: | Uncharacterized protein |
|---|---|
| ID: | G8UY02_LEGPN |
| AC: | G8UY02 |
| Organism: | Legionella pneumophila subsp. pneumophila ATCC 43290 |
| Reign: | Bacteria |
| TaxID: | 933093 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| C | 100 % |
| B-Factor: | 33.257 |
|---|---|
| Number of residues: | 36 |
| Including | |
| Standard Amino Acids: | 35 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.326 | 698.625 |
| % Hydrophobic | % Polar |
|---|---|
| 50.72 | 49.28 |
| According to VolSite | |

| HET Code: | ADP |
|---|---|
| Formula: | C10H12N5O10P2 |
| Molecular weight: | 424.177 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 61.65 % |
| Polar Surface area: | 260.7 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 14 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 3 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| 27.4357 | 17.0625 | -20.8991 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O3' | NE2 | HIS- 370 | 3.04 | 145.77 | H-Bond (Ligand Donor) |
| C3' | CG2 | VAL- 413 | 4.47 | 0 | Hydrophobic |
| O2B | N | GLY- 415 | 2.79 | 170.48 | H-Bond (Protein Donor) |
| O2A | CZ | ARG- 416 | 3.7 | 0 | Ionic (Protein Cationic) |
| C4' | CD | ARG- 416 | 4.38 | 0 | Hydrophobic |
| O2' | NH2 | ARG- 510 | 3.3 | 169.72 | H-Bond (Protein Donor) |
| O2' | O | HOH- 805 | 2.97 | 153.01 | H-Bond (Protein Donor) |