1.870 Å
X-ray
2015-03-08
| Name: | Bifunctional epoxide hydrolase 2 |
|---|---|
| ID: | HYES_HUMAN |
| AC: | P34913 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | 3.1.3.76 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 19.281 |
|---|---|
| Number of residues: | 24 |
| Including | |
| Standard Amino Acids: | 23 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.189 | 405.000 |
| % Hydrophobic | % Polar |
|---|---|
| 54.17 | 45.83 |
| According to VolSite | |

| HET Code: | HD2 |
|---|---|
| Formula: | C24H34N4O3 |
| Molecular weight: | 426.552 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 69.04 % |
| Polar Surface area: | 96.37 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 6 |
| H-Bond Donors: | 3 |
| Rings: | 7 |
| Aromatic rings: | 1 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 5 |
| X | Y | Z |
|---|---|---|
| -15.4867 | -10.595 | 14.8369 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C21 | CG2 | ILE- 363 | 3.78 | 0 | Hydrophobic |
| C19 | CB | SER- 374 | 3.8 | 0 | Hydrophobic |
| C24 | CG1 | ILE- 375 | 3.77 | 0 | Hydrophobic |
| C25 | CG | PHE- 381 | 3.8 | 0 | Hydrophobic |
| C17 | CD2 | PHE- 381 | 3.69 | 0 | Hydrophobic |
| O26 | OE1 | GLN- 384 | 2.71 | 163.65 | H-Bond (Ligand Donor) |
| C24 | SD | MET- 469 | 4.38 | 0 | Hydrophobic |
| C8 | CE | MET- 503 | 4.36 | 0 | Hydrophobic |
| C9 | CG | MET- 503 | 4.03 | 0 | Hydrophobic |