1.900 Å
X-ray
2015-04-29
Name: | Quinolinate synthase A |
---|---|
ID: | NADA_PYRHO |
AC: | O57767 |
Organism: | Pyrococcus horikoshii |
Reign: | Archaea |
TaxID: | 70601 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 20.804 |
---|---|
Number of residues: | 30 |
Including | |
Standard Amino Acids: | 26 |
Non Standard Amino Acids: | 4 |
Water Molecules: | 0 |
Cofactors: | |
Metals: | CL NA NA |
Ligandability | Volume (Å3) |
---|---|
0.436 | 364.500 |
% Hydrophobic | % Polar |
---|---|
37.96 | 62.04 |
According to VolSite |
HET Code: | NTM |
---|---|
Formula: | C7H3NO4 |
Molecular weight: | 165.103 g/mol |
DrugBank ID: | DB01796 |
Buried Surface Area: | 66.77 % |
Polar Surface area: | 93.15 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 0 |
Rings: | 1 |
Aromatic rings: | 1 |
Anionic atoms: | 2 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-8.25875 | -1.51283 | -46.3913 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O3 | NE2 | HIS- 21 | 2.75 | 167.7 | H-Bond (Protein Donor) |
O3 | N | SER- 38 | 2.92 | 145.9 | H-Bond (Protein Donor) |
O3 | OG | SER- 38 | 3.39 | 143.15 | H-Bond (Protein Donor) |
O4 | OG | SER- 38 | 2.59 | 157.05 | H-Bond (Protein Donor) |