2.900 Å
X-ray
2014-05-16
Name: | Serine/threonine-protein kinase/endoribonuclease IRE1 |
---|---|
ID: | ERN1_MOUSE |
AC: | Q9EQY0 |
Organism: | Mus musculus |
Reign: | Eukaryota |
TaxID: | 10090 |
EC Number: | 2.7.11.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 30.985 |
---|---|
Number of residues: | 33 |
Including | |
Standard Amino Acids: | 32 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | |
Metals: | MG |
Ligandability | Volume (Å3) |
---|---|
0.793 | 432.000 |
% Hydrophobic | % Polar |
---|---|
49.22 | 50.78 |
According to VolSite |
HET Code: | ADP |
---|---|
Formula: | C10H12N5O10P2 |
Molecular weight: | 424.177 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 63.56 % |
Polar Surface area: | 260.7 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 14 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 3 |
Cationic atoms: | 0 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 6 |
X | Y | Z |
---|---|---|
21.183 | 27.059 | 38.7606 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C1' | CG1 | VAL- 586 | 4.28 | 0 | Hydrophobic |
O1A | NZ | LYS- 599 | 3.38 | 123.08 | H-Bond (Protein Donor) |
O1A | NZ | LYS- 599 | 3.38 | 0 | Ionic (Protein Cationic) |
N6 | O | GLU- 643 | 3.07 | 145.69 | H-Bond (Ligand Donor) |
N1 | N | CYS- 645 | 3.27 | 153.89 | H-Bond (Protein Donor) |
C2' | CG2 | THR- 648 | 4.19 | 0 | Hydrophobic |
O3B | NZ | LYS- 690 | 3.97 | 0 | Ionic (Protein Cationic) |
O3' | ND1 | HIS- 692 | 3.03 | 159.35 | H-Bond (Protein Donor) |
O3A | MG | MG- 1003 | 2.55 | 0 | Metal Acceptor |