1.980 Å
X-ray
2014-01-03
Name: | Protein BRASSINOSTEROID INSENSITIVE 1 |
---|---|
ID: | BRI1_ARATH |
AC: | O22476 |
Organism: | Arabidopsis thaliana |
Reign: | Eukaryota |
TaxID: | 3702 |
EC Number: | 2.7.10.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 66.111 |
---|---|
Number of residues: | 31 |
Including | |
Standard Amino Acids: | 31 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.244 | 506.250 |
% Hydrophobic | % Polar |
---|---|
56.67 | 43.33 |
According to VolSite |
HET Code: | ADP |
---|---|
Formula: | C10H12N5O10P2 |
Molecular weight: | 424.177 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 66.03 % |
Polar Surface area: | 260.7 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 14 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 3 |
Cationic atoms: | 0 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 6 |
X | Y | Z |
---|---|---|
35.777 | 31.002 | 22.5681 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C1' | CD1 | ILE- 889 | 3.97 | 0 | Hydrophobic |
C5' | CZ | PHE- 894 | 4.1 | 0 | Hydrophobic |
C5' | CG2 | VAL- 897 | 3.97 | 0 | Hydrophobic |
O1A | NZ | LYS- 911 | 3.83 | 0 | Ionic (Protein Cationic) |
N6 | O | GLU- 957 | 2.96 | 165.85 | H-Bond (Ligand Donor) |
N1 | N | MET- 959 | 2.82 | 165.35 | H-Bond (Protein Donor) |
C2' | CB | SER- 963 | 4.24 | 0 | Hydrophobic |
O2B | OG | SER- 1013 | 2.99 | 171.15 | H-Bond (Protein Donor) |
O3' | O | SER- 1013 | 3.11 | 147.47 | H-Bond (Ligand Donor) |
C2' | CD2 | LEU- 1016 | 4.11 | 0 | Hydrophobic |
O3B | OD2 | ASP- 1027 | 2.66 | 139.35 | H-Bond (Protein Donor) |