1.500 Å
X-ray
2013-01-22
Name: | Tyrosine-protein kinase JAK2 |
---|---|
ID: | JAK2_HUMAN |
AC: | O60674 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 19.439 |
---|---|
Number of residues: | 32 |
Including | |
Standard Amino Acids: | 30 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.086 | 405.000 |
% Hydrophobic | % Polar |
---|---|
46.67 | 53.33 |
According to VolSite |
HET Code: | 1J5 |
---|---|
Formula: | C17H19N5O |
Molecular weight: | 309.366 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 66.83 % |
Polar Surface area: | 90.52 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 2 |
Rings: | 4 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-14.9117 | -9.22683 | -11.2883 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C1 | CD2 | LEU- 855 | 4.39 | 0 | Hydrophobic |
C25 | CB | LEU- 855 | 4.18 | 0 | Hydrophobic |
C7 | CD1 | LEU- 855 | 4.18 | 0 | Hydrophobic |
C25 | CB | VAL- 863 | 3.67 | 0 | Hydrophobic |
C24 | CG2 | VAL- 863 | 3.65 | 0 | Hydrophobic |
N16 | O | GLU- 930 | 2.95 | 172.44 | H-Bond (Ligand Donor) |
N11 | N | LEU- 932 | 3.07 | 174.09 | H-Bond (Protein Donor) |
O4 | N | SER- 936 | 3.34 | 123.98 | H-Bond (Protein Donor) |
C7 | CD2 | LEU- 983 | 3.45 | 0 | Hydrophobic |
C13 | CD1 | LEU- 983 | 3.6 | 0 | Hydrophobic |
C20 | CD2 | LEU- 983 | 3.91 | 0 | Hydrophobic |
C22 | CB | ASP- 994 | 4.16 | 0 | Hydrophobic |
N27 | O | HOH- 1438 | 3.18 | 131.67 | H-Bond (Protein Donor) |
O4 | O | HOH- 1491 | 2.52 | 156.96 | H-Bond (Ligand Donor) |