3.000 Å
X-ray
2012-12-11
Name: | Activated CDC42 kinase 1 |
---|---|
ID: | ACK1_HUMAN |
AC: | Q07912 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 85.340 |
---|---|
Number of residues: | 32 |
Including | |
Standard Amino Acids: | 32 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.452 | 1346.625 |
% Hydrophobic | % Polar |
---|---|
52.63 | 47.37 |
According to VolSite |
HET Code: | 1G0 |
---|---|
Formula: | C22H20N4O2 |
Molecular weight: | 372.420 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 59.38 % |
Polar Surface area: | 85.67 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 2 |
Rings: | 5 |
Aromatic rings: | 4 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
33.1408 | 9.74414 | 28.5463 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C5 | CG1 | VAL- 140 | 4.32 | 0 | Hydrophobic |
C30 | CG1 | VAL- 140 | 4.21 | 0 | Hydrophobic |
C21 | CD | LYS- 158 | 3.43 | 0 | Hydrophobic |
C26 | CG | MET- 181 | 3.53 | 0 | Hydrophobic |
C27 | CG2 | ILE- 190 | 3.87 | 0 | Hydrophobic |
C25 | CD2 | LEU- 192 | 3.99 | 0 | Hydrophobic |
C26 | CB | LEU- 192 | 3.94 | 0 | Hydrophobic |
C24 | SD | MET- 203 | 3.76 | 0 | Hydrophobic |
C29 | CG2 | THR- 205 | 3.65 | 0 | Hydrophobic |
C23 | CG2 | THR- 205 | 3.59 | 0 | Hydrophobic |
N13 | O | GLU- 206 | 3.02 | 155.79 | H-Bond (Ligand Donor) |
N14 | N | ALA- 208 | 3.23 | 156.82 | H-Bond (Protein Donor) |
C7 | CD2 | LEU- 259 | 4.04 | 0 | Hydrophobic |