sc-PDB

List of CHEMBLId :

This value allows a number of roughly comparable measures of half-maximal response concentration/potency/affinity to be compared on a negative logarithmic scale (e.g., an IC50 measurement of 1nM would have a pChEMBL value of 9).

Uniprot Annotation

Name:	Uridine phosphorylase
ID:	Q9K4U1_VIBCL
AC:	Q9K4U1
Organism:	Vibrio cholerae
Reign:	Bacteria
TaxID:	666
EC Number:	/

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Chains:

Chain Name:	Percentage of Residues within binding site
C	83 %
D	17 %

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Ligand binding site composition:

B-Factor:	14.215
Number of residues:	33
Including
Standard Amino Acids:	29
Non Standard Amino Acids:	1
Water Molecules:	3
Cofactors:
Metals:	CL

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Cavity properties

Ligandability	Volume (Å3)
0.331	722.250

% Hydrophobic	% Polar
38.32	61.68
According to VolSite

HET Code:	THM
Formula:	C10H14N2O5
Molecular weight:	242.229 g/mol
DrugBank ID:	DB04485
Buried Surface Area:	70.22 %
Polar Surface area:	99.1 Å2

Number of
H-Bond Acceptors:	5
H-Bond Donors:	3
Rings:	2
Aromatic rings:	0
Anionic atoms:	0
Cationic atoms:	0
Rule of Five Violation:	0
Rotatable Bonds:	2

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Mass center Coordinates

X	Y	Z
-13.6421	-9.33959	10.5544

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