2.500 Å
X-ray
2012-06-08
Name: | Proto-oncogene tyrosine-protein kinase Src |
---|---|
ID: | SRC_CHICK |
AC: | P00523 |
Organism: | Gallus gallus |
Reign: | Eukaryota |
TaxID: | 9031 |
EC Number: | 2.7.10.2 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 41.267 |
---|---|
Number of residues: | 18 |
Including | |
Standard Amino Acids: | 18 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.497 | 742.500 |
% Hydrophobic | % Polar |
---|---|
63.64 | 36.36 |
According to VolSite |
HET Code: | 0UL |
---|---|
Formula: | C11H9N5 |
Molecular weight: | 211.223 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 55.14 % |
Polar Surface area: | 69.09 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 1 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
12.7898 | -36.5351 | -2.58206 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CAC | CD2 | LEU- 273 | 4.11 | 0 | Hydrophobic |
CAM | CD1 | LEU- 273 | 3.94 | 0 | Hydrophobic |
NAA | O | GLU- 339 | 2.84 | 149.59 | H-Bond (Ligand Donor) |
NAK | N | MET- 341 | 2.91 | 165.63 | H-Bond (Protein Donor) |