2.400 Å
X-ray
2012-01-12
Name: | Ribosomal protein S6 kinase alpha-3 |
---|---|
ID: | KS6A3_HUMAN |
AC: | P51812 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.11.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 62.740 |
---|---|
Number of residues: | 29 |
Including | |
Standard Amino Acids: | 29 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.031 | 421.875 |
% Hydrophobic | % Polar |
---|---|
49.60 | 50.40 |
According to VolSite |
HET Code: | 0JG |
---|---|
Formula: | C21H21N5O3 |
Molecular weight: | 391.423 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 54.25 % |
Polar Surface area: | 127.05 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 7 |
H-Bond Donors: | 2 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
-30.3879 | 12.4129 | -21.0896 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C03 | CD1 | ILE- 428 | 4.48 | 0 | Hydrophobic |
C06 | CG1 | ILE- 428 | 4.27 | 0 | Hydrophobic |
O09 | O | ILE- 428 | 3.02 | 157.37 | H-Bond (Ligand Donor) |
C11 | CB | CYS- 436 | 3.67 | 0 | Hydrophobic |
C15 | SG | CYS- 436 | 3.84 | 0 | Hydrophobic |
C20 | SG | CYS- 436 | 4.02 | 0 | Hydrophobic |
C03 | CB | ALA- 449 | 3.8 | 0 | Hydrophobic |
C21 | CB | ALA- 449 | 3.68 | 0 | Hydrophobic |
O16 | NZ | LYS- 451 | 3.3 | 135.84 | H-Bond (Protein Donor) |
C25 | CD | LYS- 451 | 4.48 | 0 | Hydrophobic |
C22 | CB | LYS- 451 | 3.61 | 0 | Hydrophobic |
C24 | CD1 | LEU- 467 | 3.95 | 0 | Hydrophobic |
C25 | CD1 | ILE- 477 | 3.74 | 0 | Hydrophobic |
C24 | CG1 | VAL- 491 | 3.23 | 0 | Hydrophobic |
C24 | CG2 | THR- 493 | 3.56 | 0 | Hydrophobic |
N01 | O | GLU- 494 | 2.88 | 163.19 | H-Bond (Ligand Donor) |
N29 | N | MET- 496 | 2.87 | 172 | H-Bond (Protein Donor) |
C03 | CD1 | LEU- 546 | 4.44 | 0 | Hydrophobic |