2.880 Å
X-ray
2013-06-02
Name: | Soluble acetylcholine receptor |
---|---|
ID: | Q8WSF8_APLCA |
AC: | Q8WSF8 |
Organism: | Aplysia californica |
Reign: | Eukaryota |
TaxID: | 6500 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
C | 45 % |
D | 55 % |
B-Factor: | 50.909 |
---|---|
Number of residues: | 22 |
Including | |
Standard Amino Acids: | 22 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.184 | 972.000 |
% Hydrophobic | % Polar |
---|---|
43.75 | 56.25 |
According to VolSite |
HET Code: | C5E |
---|---|
Formula: | C11H15N2O |
Molecular weight: | 191.250 g/mol |
DrugBank ID: | DB09028 |
Buried Surface Area: | 73.54 % |
Polar Surface area: | 36.92 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 1 |
H-Bond Donors: | 1 |
Rings: | 3 |
Aromatic rings: | 0 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 0 |
X | Y | Z |
---|---|---|
8.106 | -43.4715 | 45.4976 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C6 | CE2 | TYR- 53 | 4.23 | 0 | Hydrophobic |
N1 | OH | TYR- 91 | 2.99 | 153.91 | H-Bond (Ligand Donor) |
C5 | CD1 | ILE- 116 | 3.85 | 0 | Hydrophobic |
C7 | CD1 | ILE- 116 | 4.29 | 0 | Hydrophobic |
C5 | CE2 | TRP- 145 | 3.49 | 0 | Hydrophobic |
C6 | CZ2 | TRP- 145 | 3.91 | 0 | Hydrophobic |
N1 | O | TRP- 145 | 2.74 | 167.46 | H-Bond (Ligand Donor) |
C7 | CB | TYR- 186 | 4.23 | 0 | Hydrophobic |
C8 | SG | CYS- 188 | 3.45 | 0 | Hydrophobic |
C8 | CZ | TYR- 193 | 4.39 | 0 | Hydrophobic |