2.840 Å
X-ray
2013-04-09
Name: | Dual specificity protein kinase TTK |
---|---|
ID: | TTK_HUMAN |
AC: | P33981 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.12.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 58.260 |
---|---|
Number of residues: | 17 |
Including | |
Standard Amino Acids: | 17 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.027 | 924.750 |
% Hydrophobic | % Polar |
---|---|
45.26 | 54.74 |
According to VolSite |
HET Code: | Z0W |
---|---|
Formula: | C10H7N3 |
Molecular weight: | 169.183 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 57.33 % |
Polar Surface area: | 41.57 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 1 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 0 |
X | Y | Z |
---|---|---|
-0.403308 | 43.107 | 17.5889 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C5 | CG2 | ILE- 531 | 3.33 | 0 | Hydrophobic |
C12 | CG2 | ILE- 531 | 4.07 | 0 | Hydrophobic |
C11 | CG1 | VAL- 539 | 4.07 | 0 | Hydrophobic |
C8 | CB | ALA- 551 | 3.63 | 0 | Hydrophobic |
C9 | CD1 | ILE- 586 | 3.27 | 0 | Hydrophobic |
C10 | SD | MET- 602 | 4.16 | 0 | Hydrophobic |
N1 | N | GLY- 605 | 3.2 | 141.21 | H-Bond (Protein Donor) |
C5 | CD1 | LEU- 654 | 3.55 | 0 | Hydrophobic |
C8 | CD2 | LEU- 654 | 3.92 | 0 | Hydrophobic |
C7 | CD1 | LEU- 654 | 3.97 | 0 | Hydrophobic |
C11 | CG2 | ILE- 663 | 4.19 | 0 | Hydrophobic |