3.000 Å
X-ray
2012-08-28
Name: | Aurora kinase B-A |
---|---|
ID: | AUKBA_XENLA |
AC: | Q6DE08 |
Organism: | Xenopus laevis |
Reign: | Eukaryota |
TaxID: | 8355 |
EC Number: | 2.7.11.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 58.881 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.948 | 462.375 |
% Hydrophobic | % Polar |
---|---|
56.20 | 43.80 |
According to VolSite |
HET Code: | A0P |
---|---|
Formula: | C10H13N6O12P3 |
Molecular weight: | 502.164 g/mol |
DrugBank ID: | DB04395 |
Buried Surface Area: | 50.19 % |
Polar Surface area: | 322.68 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 16 |
H-Bond Donors: | 4 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 2 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
22.6549 | 13.999 | 22.0862 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O2' | O | LEU- 99 | 3.14 | 159.89 | H-Bond (Ligand Donor) |
C1' | CB | LEU- 99 | 4.16 | 0 | Hydrophobic |
O1B | NZ | LYS- 122 | 3.3 | 0 | Ionic (Protein Cationic) |
O2B | NZ | LYS- 122 | 3.12 | 0 | Ionic (Protein Cationic) |
O2A | NZ | LYS- 122 | 3.48 | 0 | Ionic (Protein Cationic) |
O2B | NZ | LYS- 122 | 3.12 | 170.47 | H-Bond (Protein Donor) |
N6 | O | GLU- 171 | 2.93 | 148.3 | H-Bond (Ligand Donor) |
N1 | N | ALA- 173 | 3.07 | 159.92 | H-Bond (Protein Donor) |