2.200 Å
X-ray
2012-08-03
| Name: | Achbp |
|---|---|
| ID: | I6L8L2_CAPTE |
| AC: | I6L8L2 |
| Organism: | Capitella teleta |
| Reign: | Eukaryota |
| TaxID: | 283909 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 58 % |
| B | 42 % |
| B-Factor: | 42.106 |
|---|---|
| Number of residues: | 25 |
| Including | |
| Standard Amino Acids: | 24 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.758 | 681.750 |
| % Hydrophobic | % Polar |
|---|---|
| 45.05 | 54.95 |
| According to VolSite | |

| HET Code: | SW4 |
|---|---|
| Formula: | C14H21N2O2 |
| Molecular weight: | 249.329 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 70.27 % |
| Polar Surface area: | 58.96 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 3 |
| H-Bond Donors: | 2 |
| Rings: | 3 |
| Aromatic rings: | 1 |
| Anionic atoms: | 0 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| 16.0133 | 27.4347 | 19.2214 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C03 | CD | LYS- 86 | 4.27 | 0 | Hydrophobic |
| C07 | CG1 | ILE- 118 | 4.22 | 0 | Hydrophobic |
| C05 | CG1 | ILE- 118 | 3.63 | 0 | Hydrophobic |
| C03 | CZ | PHE- 120 | 4.16 | 0 | Hydrophobic |
| C06 | CD2 | LEU- 126 | 4.25 | 0 | Hydrophobic |
| C11 | CD1 | ILE- 128 | 4.11 | 0 | Hydrophobic |
| N17 | O | TRP- 153 | 2.87 | 157.95 | H-Bond (Ligand Donor) |
| C07 | CG1 | VAL- 154 | 4.5 | 0 | Hydrophobic |
| C15 | CE1 | PHE- 175 | 4.14 | 0 | Hydrophobic |
| C15 | CD2 | TYR- 194 | 3.95 | 0 | Hydrophobic |
| C13 | SG | CYS- 197 | 3.66 | 0 | Hydrophobic |
| C18 | SG | CYS- 197 | 3.65 | 0 | Hydrophobic |
| O01 | OE2 | GLU- 198 | 3.12 | 130.36 | H-Bond (Ligand Donor) |
| C02 | CG | GLU- 198 | 4.04 | 0 | Hydrophobic |
| C13 | CE2 | TYR- 201 | 3.63 | 0 | Hydrophobic |
| N09 | O | HOH- 2080 | 2.77 | 179.97 | H-Bond (Protein Donor) |