2.400 Å
X-ray
2012-02-08
Name: | Hypoxia-inducible factor 1-alpha inhibitor |
---|---|
ID: | HIF1N_HUMAN |
AC: | Q9NWT6 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 1.14.11.30 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 49.093 |
---|---|
Number of residues: | 25 |
Including | |
Standard Amino Acids: | 22 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 2 |
Cofactors: | |
Metals: | ZN |
Ligandability | Volume (Å3) |
---|---|
0.025 | 543.375 |
% Hydrophobic | % Polar |
---|---|
40.37 | 59.63 |
According to VolSite |
HET Code: | DZA |
---|---|
Formula: | C6H11N2O3 |
Molecular weight: | 159.163 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 65.63 % |
Polar Surface area: | 72.47 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 1 |
Rings: | 0 |
Aromatic rings: | 0 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
21.0353 | 25.2435 | 28.4285 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C07 | CD2 | LEU- 188 | 4.27 | 0 | Hydrophobic |
O11 | OG1 | THR- 196 | 2.53 | 169.19 | H-Bond (Protein Donor) |
C08 | CG2 | THR- 196 | 3.79 | 0 | Hydrophobic |
C05 | CB | ASN- 205 | 3.88 | 0 | Hydrophobic |
C07 | CE1 | PHE- 207 | 3.68 | 0 | Hydrophobic |
O10 | NZ | LYS- 214 | 2.59 | 148.42 | H-Bond (Protein Donor) |
O10 | NZ | LYS- 214 | 2.59 | 0 | Ionic (Protein Cationic) |
O11 | NZ | LYS- 214 | 3.65 | 0 | Ionic (Protein Cationic) |
C05 | CD1 | ILE- 273 | 3.95 | 0 | Hydrophobic |
C08 | CD1 | ILE- 281 | 4.04 | 0 | Hydrophobic |
O01 | ZN | ZN- 1359 | 2.25 | 0 | Metal Acceptor |