sc-PDB

List of CHEMBLId :

This value allows a number of roughly comparable measures of half-maximal response concentration/potency/affinity to be compared on a negative logarithmic scale (e.g., an IC50 measurement of 1nM would have a pChEMBL value of 9).

Uniprot Annotation

Name:	RNA-directed RNA polymerase
ID:	RDRP_BPPH6
AC:	P11124
Organism:	Pseudomonas phage phi6
Reign:	Viruses
TaxID:	10879
EC Number:	2.7.7.48

---

Chains:

Chain Name:	Percentage of Residues within binding site
Q	100 %

---

Ligand binding site composition:

B-Factor:	72.109
Number of residues:	31
Including
Standard Amino Acids:	29
Non Standard Amino Acids:	2
Water Molecules:	0
Cofactors:	ATP
Metals:	MG

---

Cavity properties

Ligandability	Volume (Å3)
0.347	2338.875

% Hydrophobic	% Polar
29.87	70.13
According to VolSite

HET Code:	GTP
Formula:	C10H12N5O14P3
Molecular weight:	519.149 g/mol
DrugBank ID:	DB04137
Buried Surface Area:	40.19 %
Polar Surface area:	335.56 Å2

Number of
H-Bond Acceptors:	17
H-Bond Donors:	4
Rings:	3
Aromatic rings:	1
Anionic atoms:	4
Cationic atoms:	0
Rule of Five Violation:	2
Rotatable Bonds:	8

---

Mass center Coordinates

X	Y	Z
56.4441	14.7395	58.2852

• 2D View
• 3D View