2.990 Å
X-ray
2013-09-06
Name: | MAP kinase-activated protein kinase 2 |
---|---|
ID: | MAPK2_HUMAN |
AC: | P49137 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.11.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 74.827 |
---|---|
Number of residues: | 23 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.040 | 560.250 |
% Hydrophobic | % Polar |
---|---|
55.42 | 44.58 |
According to VolSite |
HET Code: | YRZ |
---|---|
Formula: | C13H19N6 |
Molecular weight: | 259.330 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 59.85 % |
Polar Surface area: | 70.86 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 3 |
Rings: | 4 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-36.2365 | -17.4445 | -13.8768 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C4 | CB | LEU- 70 | 4.02 | 0 | Hydrophobic |
C11 | CG2 | VAL- 78 | 4.13 | 0 | Hydrophobic |
N16 | N | LEU- 141 | 3.26 | 167.5 | H-Bond (Protein Donor) |
N8 | O | GLU- 190 | 2.99 | 149.29 | H-Bond (Ligand Donor) |
C5 | CD1 | LEU- 193 | 3.77 | 0 | Hydrophobic |
N8 | OD2 | ASP- 207 | 3.08 | 159.59 | H-Bond (Ligand Donor) |
N8 | OD2 | ASP- 207 | 3.08 | 0 | Ionic (Ligand Cationic) |
N8 | OD1 | ASP- 207 | 3.87 | 0 | Ionic (Ligand Cationic) |