sc-PDB

List of CHEMBLId :

This value allows a number of roughly comparable measures of half-maximal response concentration/potency/affinity to be compared on a negative logarithmic scale (e.g., an IC50 measurement of 1nM would have a pChEMBL value of 9).

Uniprot Annotation

Name:	Geranyl diphosphate 2-C-methyltransferase
ID:	GPPMT_STRCO
AC:	Q9F1Y5
Organism:	Streptomyces coelicolor / M145)
Reign:	Bacteria
TaxID:	100226
EC Number:	2.1.1.255

---

Chains:

Chain Name:	Percentage of Residues within binding site
J	100 %

---

Ligand binding site composition:

B-Factor:	20.935
Number of residues:	43
Including
Standard Amino Acids:	37
Non Standard Amino Acids:	0
Water Molecules:	6
Cofactors:
Metals:

---

Cavity properties

Ligandability	Volume (Å3)
0.856	351.000

% Hydrophobic	% Polar
52.88	47.12
According to VolSite

HET Code:	SAH
Formula:	C14H20N6O5S
Molecular weight:	384.411 g/mol
DrugBank ID:	DB01752
Buried Surface Area:	82.16 %
Polar Surface area:	212.38 Å2

Number of
H-Bond Acceptors:	10
H-Bond Donors:	4
Rings:	3
Aromatic rings:	2
Anionic atoms:	1
Cationic atoms:	1
Rule of Five Violation:	1
Rotatable Bonds:	7

---

Mass center Coordinates

X	Y	Z
-0.168231	28.2498	35.6512

• 2D View
• 3D View