1.500 Å
X-ray
2011-07-23
| Name: | Heat shock protein HSP 90-alpha |
|---|---|
| ID: | HS90A_HUMAN |
| AC: | P07900 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 13.503 |
|---|---|
| Number of residues: | 38 |
| Including | |
| Standard Amino Acids: | 35 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 2 |
| Cofactors: | |
| Metals: | MG |
| Ligandability | Volume (Å3) |
|---|---|
| 0.636 | 462.375 |
| % Hydrophobic | % Polar |
|---|---|
| 44.53 | 55.47 |
| According to VolSite | |

| HET Code: | AGS |
|---|---|
| Formula: | C10H14N5O12P3S |
| Molecular weight: | 521.231 g/mol |
| DrugBank ID: | DB02930 |
| Buried Surface Area: | 48.32 % |
| Polar Surface area: | 329.24 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 17 |
| H-Bond Donors: | 5 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 2 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 8 |
| X | Y | Z |
|---|---|---|
| 4.73907 | 6.1736 | 34.2984 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O1A | ND2 | ASN- 51 | 2.96 | 139.06 | H-Bond (Protein Donor) |
| N6 | OD2 | ASP- 93 | 2.99 | 158.81 | H-Bond (Ligand Donor) |
| C1' | SD | MET- 98 | 3.82 | 0 | Hydrophobic |
| C4' | CB | ASN- 106 | 3.97 | 0 | Hydrophobic |
| C1' | CB | ASN- 106 | 4.29 | 0 | Hydrophobic |
| O2' | ND2 | ASN- 106 | 3.1 | 124.23 | H-Bond (Protein Donor) |
| C5' | CD2 | LEU- 107 | 4.47 | 0 | Hydrophobic |
| O2A | N | PHE- 138 | 2.93 | 165.63 | H-Bond (Protein Donor) |
| O2B | MG | MG- 401 | 2.07 | 0 | Metal Acceptor |
| O1A | MG | MG- 401 | 2.06 | 0 | Metal Acceptor |
| N1 | O | HOH- 502 | 2.68 | 175.85 | H-Bond (Protein Donor) |
| O3B | O | HOH- 571 | 2.69 | 142.16 | H-Bond (Protein Donor) |