1.240 Å
X-ray
2011-07-21
Name: | Heat shock protein HSP 90-alpha |
---|---|
ID: | HS90A_HUMAN |
AC: | P07900 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 13.568 |
---|---|
Number of residues: | 37 |
Including | |
Standard Amino Acids: | 34 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 2 |
Cofactors: | |
Metals: | MG |
Ligandability | Volume (Å3) |
---|---|
0.299 | 479.250 |
% Hydrophobic | % Polar |
---|---|
43.66 | 56.34 |
According to VolSite |
HET Code: | ACP |
---|---|
Formula: | C11H14N5O12P3 |
Molecular weight: | 501.176 g/mol |
DrugBank ID: | DB03909 |
Buried Surface Area: | 52.05 % |
Polar Surface area: | 310.64 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 16 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 2 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
10.5294 | -2.54974 | 17.0975 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O1A | ND2 | ASN- 51 | 2.96 | 137.46 | H-Bond (Protein Donor) |
N6 | OD2 | ASP- 93 | 2.95 | 159.12 | H-Bond (Ligand Donor) |
C1' | SD | MET- 98 | 3.83 | 0 | Hydrophobic |
C4' | CB | ASN- 106 | 3.99 | 0 | Hydrophobic |
C1' | CB | ASN- 106 | 4.18 | 0 | Hydrophobic |
C5' | CD2 | LEU- 107 | 4.32 | 0 | Hydrophobic |
O2G | N | GLY- 137 | 3.22 | 153.22 | H-Bond (Protein Donor) |
O2A | N | PHE- 138 | 2.93 | 165.03 | H-Bond (Protein Donor) |
O3G | MG | MG- 401 | 1.95 | 0 | Metal Acceptor |
O2B | MG | MG- 401 | 2.09 | 0 | Metal Acceptor |
O1A | MG | MG- 401 | 2.09 | 0 | Metal Acceptor |
N1 | O | HOH- 505 | 2.79 | 157.62 | H-Bond (Protein Donor) |
O1B | O | HOH- 718 | 3.38 | 179.99 | H-Bond (Protein Donor) |