1.800 Å
X-ray
2011-06-03
Name: | Extracellular fatty acid-binding protein |
---|---|
ID: | EXFAB_CHICK |
AC: | P21760 |
Organism: | Gallus gallus |
Reign: | Eukaryota |
TaxID: | 9031 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 46.459 |
---|---|
Number of residues: | 18 |
Including | |
Standard Amino Acids: | 16 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | |
Metals: | FE |
Ligandability | Volume (Å3) |
---|---|
0.169 | 681.750 |
% Hydrophobic | % Polar |
---|---|
52.48 | 47.52 |
According to VolSite |
HET Code: | DBH |
---|---|
Formula: | C7H5O4 |
Molecular weight: | 153.112 g/mol |
DrugBank ID: | DB01672 |
Buried Surface Area: | 76.85 % |
Polar Surface area: | 80.59 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 2 |
Rings: | 1 |
Aromatic rings: | 1 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
-37.3279 | 0.524455 | -45.7113 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O9 | OG1 | THR- 21 | 3.04 | 153.22 | H-Bond (Protein Donor) |
O6 | NZ | LYS- 82 | 2.87 | 145.09 | H-Bond (Protein Donor) |
C9 | CB | ALA- 99 | 3.58 | 0 | Hydrophobic |
O3 | NH2 | ARG- 101 | 3.19 | 140.11 | H-Bond (Protein Donor) |
C9 | CB | ARG- 101 | 3.89 | 0 | Hydrophobic |
C15 | CB | LEU- 108 | 3.43 | 0 | Hydrophobic |
C15 | CB | MET- 110 | 3.71 | 0 | Hydrophobic |
O3 | NH2 | ARG- 112 | 3.08 | 137.68 | H-Bond (Protein Donor) |
O6 | NH2 | ARG- 112 | 3.16 | 142.83 | H-Bond (Protein Donor) |
O6 | NH1 | ARG- 112 | 3.08 | 146.61 | H-Bond (Protein Donor) |
O3 | FE | FE- 163 | 2.12 | 0 | Metal Acceptor |
O6 | FE | FE- 163 | 2.31 | 0 | Metal Acceptor |