2.290 Å
X-ray
2011-05-06
Name: | Salicylate synthase |
---|---|
ID: | MBTI_MYCTU |
AC: | P9WFX1 |
Organism: | Mycobacterium tuberculosis |
Reign: | Bacteria |
TaxID: | 83332 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 40.471 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 26 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.148 | 850.500 |
% Hydrophobic | % Polar |
---|---|
36.51 | 63.49 |
According to VolSite |
HET Code: | RVC |
---|---|
Formula: | C13H10O6 |
Molecular weight: | 262.215 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 60.05 % |
Polar Surface area: | 109.72 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 6 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 2 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
-1.133 | -5.17726 | 28.0851 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C9 | CB | PRO- 251 | 4.02 | 0 | Hydrophobic |
C10 | CB | LEU- 268 | 3.68 | 0 | Hydrophobic |
C4 | CG2 | THR- 361 | 3.84 | 0 | Hydrophobic |
C10 | CG2 | THR- 361 | 4.1 | 0 | Hydrophobic |
OA | OH | TYR- 385 | 2.97 | 164.61 | H-Bond (Protein Donor) |
C2 | CD1 | LEU- 404 | 3.72 | 0 | Hydrophobic |
OA | N | GLY- 419 | 2.99 | 135.53 | H-Bond (Protein Donor) |
OB' | NZ | LYS- 438 | 3.91 | 0 | Ionic (Protein Cationic) |
OA' | NZ | LYS- 438 | 3.73 | 0 | Ionic (Protein Cationic) |
DuAr | NZ | LYS- 438 | 3.35 | 5.52 | Pi/Cation |
C2 | CD | LYS- 438 | 3.87 | 0 | Hydrophobic |