1.700 Å
X-ray
2011-04-22
| Name: | Glutamate receptor 2 |
|---|---|
| ID: | GRIA2_HUMAN |
| AC: | P42262 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 50 % |
| C | 50 % |
| B-Factor: | 18.055 |
|---|---|
| Number of residues: | 39 |
| Including | |
| Standard Amino Acids: | 36 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 3 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.842 | 425.250 |
| % Hydrophobic | % Polar |
|---|---|
| 36.51 | 63.49 |
| According to VolSite | |

| HET Code: | RN8 |
|---|---|
| Formula: | C22H14N2O4S2 |
| Molecular weight: | 434.488 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 65.74 % |
| Polar Surface area: | 184.32 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 6 |
| H-Bond Donors: | 0 |
| Rings: | 3 |
| Aromatic rings: | 3 |
| Anionic atoms: | 2 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| 61.1059 | 26.2088 | 43.1824 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C5 | CG | PRO- 105 | 3.37 | 0 | Hydrophobic |
| C4 | CG | PRO- 105 | 3.31 | 0 | Hydrophobic |
| O28 | OG | SER- 108 | 2.91 | 135.42 | H-Bond (Protein Donor) |
| O27 | OG | SER- 108 | 2.79 | 140.57 | H-Bond (Protein Donor) |
| C4 | CB | SER- 108 | 3.73 | 0 | Hydrophobic |
| C5 | CB | SER- 108 | 3.71 | 0 | Hydrophobic |
| S30 | CB | SER- 217 | 4.46 | 0 | Hydrophobic |
| C2 | CG1 | VAL- 238 | 4.06 | 0 | Hydrophobic |
| C1 | CG1 | VAL- 238 | 3.91 | 0 | Hydrophobic |
| C1 | CD2 | LEU- 239 | 3.92 | 0 | Hydrophobic |
| C2 | CD2 | LEU- 239 | 3.94 | 0 | Hydrophobic |
| C1 | CB | ASN- 242 | 3.75 | 0 | Hydrophobic |
| C2 | CB | ASN- 242 | 3.72 | 0 | Hydrophobic |