2.520 Å
X-ray
2011-01-02
| Name: | 43.2 kDa salivary protein |
|---|---|
| ID: | Q5WPU9_LUTLO |
| AC: | Q5WPU9 |
| Organism: | Lutzomyia longipalpis |
| Reign: | Eukaryota |
| TaxID: | 7200 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 41.096 |
|---|---|
| Number of residues: | 27 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.116 | 1113.750 |
| % Hydrophobic | % Polar |
|---|---|
| 36.36 | 63.64 |
| According to VolSite | |

| HET Code: | SRO |
|---|---|
| Formula: | C10H13N2O |
| Molecular weight: | 177.223 g/mol |
| DrugBank ID: | DB08839 |
| Buried Surface Area: | 74.79 % |
| Polar Surface area: | 63.66 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 1 |
| H-Bond Donors: | 3 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 37.9052 | -24.1092 | -12.3195 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CE3 | CB | THR- 29 | 3.94 | 0 | Hydrophobic |
| CA | CG2 | THR- 29 | 3.43 | 0 | Hydrophobic |
| CZ2 | CB | TYR- 90 | 4.01 | 0 | Hydrophobic |
| CE3 | CD1 | ILE- 278 | 4 | 0 | Hydrophobic |
| OH | O | THR- 327 | 2.53 | 123.8 | H-Bond (Ligand Donor) |
| OH | OG1 | THR- 327 | 3.27 | 147.54 | H-Bond (Ligand Donor) |
| NZ | OG1 | THR- 327 | 2.75 | 161.29 | H-Bond (Ligand Donor) |
| CA | CB | THR- 327 | 4.46 | 0 | Hydrophobic |
| NZ | O | PHE- 344 | 2.88 | 125.7 | H-Bond (Ligand Donor) |
| CA | CD2 | PHE- 344 | 3.4 | 0 | Hydrophobic |