2.230 Å
X-ray
2010-10-03
Name: | Bifunctional protein FolD |
---|---|
ID: | FOLD_CAMJE |
AC: | Q0PA35 |
Organism: | Campylobacter jejuni subsp. jejuni serotype O:2 |
Reign: | Bacteria |
TaxID: | 192222 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 63.573 |
---|---|
Number of residues: | 34 |
Including | |
Standard Amino Acids: | 33 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.168 | 911.250 |
% Hydrophobic | % Polar |
---|---|
52.96 | 47.04 |
According to VolSite |
HET Code: | NAD |
---|---|
Formula: | C21H26N7O14P2 |
Molecular weight: | 662.417 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 52.37 % |
Polar Surface area: | 343.54 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 18 |
H-Bond Donors: | 6 |
Rings: | 5 |
Aromatic rings: | 3 |
Anionic atoms: | 2 |
Cationic atoms: | 1 |
Rule of Five Violation: | 3 |
Rotatable Bonds: | 11 |
X | Y | Z |
---|---|---|
53.3972 | -16.0065 | -21.2557 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O3B | N | ALA- 165 | 2.76 | 168.34 | H-Bond (Protein Donor) |
O1N | OG | SER- 166 | 2.62 | 125.81 | H-Bond (Protein Donor) |
C5N | CG2 | ILE- 168 | 4.21 | 0 | Hydrophobic |
C5N | CG2 | VAL- 169 | 3.57 | 0 | Hydrophobic |
C2B | CB | HIS- 188 | 4.34 | 0 | Hydrophobic |
C2B | CB | ILE- 189 | 4.31 | 0 | Hydrophobic |
O2B | N | ILE- 189 | 2.98 | 167.19 | H-Bond (Protein Donor) |
C5D | CB | ALA- 207 | 4.42 | 0 | Hydrophobic |
C1B | CB | ALA- 208 | 4.27 | 0 | Hydrophobic |
C3N | CG1 | VAL- 228 | 4.21 | 0 | Hydrophobic |
C5N | CG1 | VAL- 228 | 4.25 | 0 | Hydrophobic |
C3N | CD1 | ILE- 230 | 4.13 | 0 | Hydrophobic |
O1N | O | HOH- 298 | 2.81 | 150.16 | H-Bond (Protein Donor) |