1.450 Å
X-ray
2010-03-08
| Name: | Methyl-coenzyme M reductase I subunit alpha | Methyl-coenzyme M reductase I subunit beta |
|---|---|---|
| ID: | MCRA_METTM | MCRB_METTM |
| AC: | P11558 | P11560 |
| Organism: | Methanothermobacter marburgensis | |
| Reign: | Archaea | |
| TaxID: | 79929 | |
| EC Number: | 2.8.4.1 | |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 16 % |
| D | 47 % |
| E | 26 % |
| F | 11 % |
| B-Factor: | 8.347 |
|---|---|
| Number of residues: | 19 |
| Including | |
| Standard Amino Acids: | 17 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.280 | 945.000 |
| % Hydrophobic | % Polar |
|---|---|
| 50.36 | 49.64 |
| According to VolSite | |

| HET Code: | COM |
|---|---|
| Formula: | C2H5O3S2 |
| Molecular weight: | 141.189 g/mol |
| DrugBank ID: | DB09110 |
| Buried Surface Area: | 55.79 % |
| Polar Surface area: | 104.38 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 4 |
| H-Bond Donors: | 1 |
| Rings: | 0 |
| Aromatic rings: | 0 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 30.3824 | 38.59 | -58.7303 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O2S | NH1 | ARG- 120 | 2.77 | 121.58 | H-Bond (Protein Donor) |
| S1 | CE2 | TYR- 333 | 3.93 | 0 | Hydrophobic |
| C2 | CE1 | PHE- 361 | 3.88 | 0 | Hydrophobic |
| C2 | CE2 | TYR- 367 | 3.7 | 0 | Hydrophobic |
| S1 | CZ | TYR- 367 | 4.02 | 0 | Hydrophobic |
| C1 | CB | PHE- 443 | 3.57 | 0 | Hydrophobic |
| C2 | CD2 | PHE- 443 | 4.06 | 0 | Hydrophobic |
| O1S | N | TYR- 444 | 2.72 | 155.19 | H-Bond (Protein Donor) |