2.400 Å
X-ray
2009-11-12
Name: | Ribosomal protein S6 kinase alpha-5 |
---|---|
ID: | KS6A5_HUMAN |
AC: | O75582 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.11.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 60.646 |
---|---|
Number of residues: | 29 |
Including | |
Standard Amino Acids: | 29 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.748 | 550.125 |
% Hydrophobic | % Polar |
---|---|
42.33 | 57.67 |
According to VolSite |
HET Code: | ANP |
---|---|
Formula: | C10H13N6O12P3 |
Molecular weight: | 502.164 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 47.73 % |
Polar Surface area: | 322.68 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 16 |
H-Bond Donors: | 4 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 2 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
25.5377 | 37.7632 | 76.6449 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C1' | CB | LEU- 432 | 4.05 | 0 | Hydrophobic |
N6 | O | GLU- 499 | 2.83 | 176.22 | H-Bond (Ligand Donor) |
N1 | N | LEU- 501 | 2.82 | 172.27 | H-Bond (Protein Donor) |
N3B | OE1 | GLU- 548 | 2.87 | 132.41 | H-Bond (Ligand Donor) |
C2' | CD2 | LEU- 551 | 3.54 | 0 | Hydrophobic |
C3' | CD1 | ILE- 564 | 4.26 | 0 | Hydrophobic |