2.600 Å
X-ray
2009-04-30
Name: | Dual specificity protein kinase TTK |
---|---|
ID: | TTK_HUMAN |
AC: | P33981 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.12.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 30.232 |
---|---|
Number of residues: | 34 |
Including | |
Standard Amino Acids: | 32 |
Non Standard Amino Acids: | 2 |
Water Molecules: | 0 |
Cofactors: | |
Metals: | MG |
Ligandability | Volume (Å3) |
---|---|
1.057 | 475.875 |
% Hydrophobic | % Polar |
---|---|
58.87 | 41.13 |
According to VolSite |
HET Code: | 92M |
---|---|
Formula: | C25H34N6O3 |
Molecular weight: | 466.576 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 61.74 % |
Polar Surface area: | 94.06 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 2 |
Rings: | 5 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
0.495971 | 18.7353 | 47.8371 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CBC | CD1 | ILE- 531 | 4.26 | 0 | Hydrophobic |
CBA | CD1 | ILE- 531 | 3.82 | 0 | Hydrophobic |
CAF | CG2 | ILE- 531 | 3.6 | 0 | Hydrophobic |
CAQ | CG2 | ILE- 531 | 3.91 | 0 | Hydrophobic |
CAD | CG2 | VAL- 539 | 4.25 | 0 | Hydrophobic |
CAG | CG2 | VAL- 539 | 4.21 | 0 | Hydrophobic |
CAC | CD1 | ILE- 586 | 4.27 | 0 | Hydrophobic |
CBC | SG | CYS- 604 | 4.33 | 0 | Hydrophobic |
N1 | N | GLY- 605 | 3.1 | 144.94 | H-Bond (Protein Donor) |
NAN | O | GLY- 605 | 3.19 | 161.75 | H-Bond (Ligand Donor) |
CAX | CG1 | ILE- 607 | 4.16 | 0 | Hydrophobic |
CAJ | CB | ASP- 608 | 4.28 | 0 | Hydrophobic |
CAX | CB | SER- 611 | 3.47 | 0 | Hydrophobic |
CAP | CD1 | LEU- 654 | 3.94 | 0 | Hydrophobic |
CAJ | CD1 | ILE- 663 | 4.28 | 0 | Hydrophobic |
CAC | CD1 | ILE- 663 | 3.78 | 0 | Hydrophobic |
CAG | SD | MET- 671 | 4.4 | 0 | Hydrophobic |
CAY | CB | PRO- 673 | 3.97 | 0 | Hydrophobic |
CAI | CG | PRO- 673 | 4.06 | 0 | Hydrophobic |