2.800 Å
X-ray
2009-04-13
Name: | Ethanolamine utilization protein EutJ |
---|---|
ID: | Q3AE93_CARHZ |
AC: | Q3AE93 |
Organism: | Carboxydothermus hydrogenoformans |
Reign: | Bacteria |
TaxID: | 246194 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 38.206 |
---|---|
Number of residues: | 42 |
Including | |
Standard Amino Acids: | 42 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.889 | 577.125 |
% Hydrophobic | % Polar |
---|---|
60.23 | 39.77 |
According to VolSite |
HET Code: | ATP |
---|---|
Formula: | C10H12N5O13P3 |
Molecular weight: | 503.149 g/mol |
DrugBank ID: | DB00171 |
Buried Surface Area: | 73.43 % |
Polar Surface area: | 319.88 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 17 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 2 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
85.6738 | 22.9562 | 37.8389 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O1B | OG1 | THR- 34 | 2.75 | 176.14 | H-Bond (Protein Donor) |
C5' | CB | ALA- 35 | 3.57 | 0 | Hydrophobic |
O3A | N | GLY- 145 | 3.26 | 140.46 | H-Bond (Protein Donor) |
O2' | OE2 | GLU- 187 | 2.87 | 177.18 | H-Bond (Ligand Donor) |
O3' | NZ | LYS- 190 | 3.08 | 156.26 | H-Bond (Protein Donor) |
C2' | CE | LYS- 190 | 4.03 | 0 | Hydrophobic |
O2A | N | GLY- 232 | 2.58 | 175.02 | H-Bond (Protein Donor) |
C5' | CD1 | LEU- 258 | 4.43 | 0 | Hydrophobic |