2.700 Å
X-ray
2008-07-25
Name: | Dual specificity mitogen-activated protein kinase kinase 1 |
---|---|
ID: | MP2K1_HUMAN |
AC: | Q02750 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.12.2 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 62.603 |
---|---|
Number of residues: | 33 |
Including | |
Standard Amino Acids: | 31 |
Non Standard Amino Acids: | 2 |
Water Molecules: | 0 |
Cofactors: | ATP |
Metals: | MG |
Ligandability | Volume (Å3) |
---|---|
0.803 | 1012.500 |
% Hydrophobic | % Polar |
---|---|
38.67 | 61.33 |
According to VolSite |
HET Code: | 1CX |
---|---|
Formula: | C15H12F3IN2O3 |
Molecular weight: | 452.167 g/mol |
DrugBank ID: | DB06892 |
Buried Surface Area: | 71.63 % |
Polar Surface area: | 70.92 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 2 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
40.1005 | -13.8747 | 5.90383 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
F3 | CD | LYS- 97 | 3.63 | 0 | Hydrophobic |
O3 | NZ | LYS- 97 | 3.14 | 154.95 | H-Bond (Protein Donor) |
F2 | CD1 | LEU- 115 | 3.95 | 0 | Hydrophobic |
C5 | CD2 | LEU- 118 | 3.91 | 0 | Hydrophobic |
I1 | CB | VAL- 127 | 4.14 | 0 | Hydrophobic |
C1 | CG2 | ILE- 141 | 4.13 | 0 | Hydrophobic |
F3 | CD1 | ILE- 141 | 3.58 | 0 | Hydrophobic |
F2 | CD1 | ILE- 141 | 3.98 | 0 | Hydrophobic |
C1 | SD | MET- 143 | 3.91 | 0 | Hydrophobic |
F3 | CE | MET- 143 | 3.95 | 0 | Hydrophobic |
I1 | CB | CYS- 207 | 4.41 | 0 | Hydrophobic |
C6 | CB | CYS- 207 | 4.41 | 0 | Hydrophobic |
C7 | CB | ASP- 208 | 4.29 | 0 | Hydrophobic |
I1 | CE1 | PHE- 209 | 4.1 | 0 | Hydrophobic |
C4 | CG2 | VAL- 211 | 4.19 | 0 | Hydrophobic |
F1 | CG2 | VAL- 211 | 3.7 | 0 | Hydrophobic |
F1 | CB | SER- 212 | 3.9 | 0 | Hydrophobic |
C12 | CD2 | LEU- 215 | 4.25 | 0 | Hydrophobic |
C10 | CD2 | LEU- 215 | 3.75 | 0 | Hydrophobic |
C9 | CG1 | ILE- 216 | 4.25 | 0 | Hydrophobic |
C14 | CE | MET- 219 | 4.25 | 0 | Hydrophobic |