1.500 Å
X-ray
2010-12-09
Name: | Chitinase A |
---|---|
ID: | Q9AMP1_VIBHA |
AC: | Q9AMP1 |
Organism: | Vibrio harveyi |
Reign: | Bacteria |
TaxID: | 669 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 13.062 |
---|---|
Number of residues: | 19 |
Including | |
Standard Amino Acids: | 17 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.353 | 1019.250 |
% Hydrophobic | % Polar |
---|---|
41.06 | 58.94 |
According to VolSite |
HET Code: | CTI |
---|---|
Formula: | C21H18NO4 |
Molecular weight: | 348.372 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 34.11 % |
Polar Surface area: | 40.79 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 0 |
Rings: | 5 |
Aromatic rings: | 4 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
17.4525 | -9.16208 | 22.9089 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C21 | CB | TRP- 275 | 3.99 | 0 | Hydrophobic |
C14 | CB | TRP- 275 | 4.18 | 0 | Hydrophobic |
DuAr | DuAr | TRP- 275 | 3.67 | 0 | Aromatic Face/Face |
DuAr | DuAr | TRP- 275 | 3.97 | 0 | Aromatic Face/Face |
C19 | CG2 | THR- 276 | 4.08 | 0 | Hydrophobic |
C21 | CG2 | THR- 276 | 3.79 | 0 | Hydrophobic |
C7 | CB | ASP- 392 | 4.07 | 0 | Hydrophobic |
C25 | CB | TRP- 397 | 4.45 | 0 | Hydrophobic |
C22 | CB | TRP- 397 | 3.69 | 0 | Hydrophobic |
DuAr | DuAr | TRP- 397 | 3.84 | 0 | Aromatic Face/Face |