1.900 Å
X-ray
2010-05-18
Name: | 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1b, chloroplastic |
---|---|
ID: | HGL1B_WHEAT |
AC: | Q1XH05 |
Organism: | Triticum aestivum |
Reign: | Eukaryota |
TaxID: | 4565 |
EC Number: | 3.2.1.182 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 15.450 |
---|---|
Number of residues: | 28 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 5 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.830 | 698.625 |
% Hydrophobic | % Polar |
---|---|
50.24 | 49.76 |
According to VolSite |
HET Code: | HBO |
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Formula: | C9H9NO5 |
Molecular weight: | 211.171 g/mol |
DrugBank ID: | DB02185 |
Buried Surface Area: | 52.68 % |
Polar Surface area: | 79.23 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 2 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
-1.69033 | 2.4176 | -41.7217 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
OHB | OE2 | GLU- 191 | 2.92 | 145.55 | H-Bond (Ligand Donor) |
C9B | CZ | PHE- 198 | 3.67 | 0 | Hydrophobic |
C2B | CZ2 | TRP- 379 | 4.4 | 0 | Hydrophobic |
C9B | CD2 | TRP- 379 | 3.94 | 0 | Hydrophobic |
DuAr | DuAr | TRP- 379 | 3.77 | 0 | Aromatic Face/Face |
O3B | O | HOH- 727 | 3.07 | 179.95 | H-Bond (Protein Donor) |