2.150 Å
X-ray
2010-01-14
Name: | Tyrosine-protein kinase Lck |
---|---|
ID: | LCK_HUMAN |
AC: | P06239 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.10.2 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 3.566 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.812 | 469.125 |
% Hydrophobic | % Polar |
---|---|
52.52 | 47.48 |
According to VolSite |
HET Code: | KSC |
---|---|
Formula: | C19H22N6O2 |
Molecular weight: | 366.417 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 37.21 % |
Polar Surface area: | 106.57 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 6 |
H-Bond Donors: | 3 |
Rings: | 4 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
27.3412 | 35.4516 | 8.19826 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C21 | CB | LEU- 251 | 4.31 | 0 | Hydrophobic |
C19 | CD2 | LEU- 251 | 3.96 | 0 | Hydrophobic |
C17 | CD1 | LEU- 251 | 3.79 | 0 | Hydrophobic |
C10 | CG1 | VAL- 259 | 4.49 | 0 | Hydrophobic |
N25 | O | GLU- 317 | 3.43 | 134.62 | H-Bond (Ligand Donor) |
O24 | N | MET- 319 | 3.01 | 153.56 | H-Bond (Protein Donor) |
C13 | CB | SER- 323 | 4.08 | 0 | Hydrophobic |
C15 | CD2 | LEU- 371 | 4 | 0 | Hydrophobic |