1.640 Å
X-ray
2007-05-07
Name: | Uncharacterized protein |
---|---|
ID: | Q5SHN1_THET8 |
AC: | Q5SHN1 |
Organism: | Thermus thermophilus |
Reign: | Bacteria |
TaxID: | 300852 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 9.781 |
---|---|
Number of residues: | 36 |
Including | |
Standard Amino Acids: | 33 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 3 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.306 | 448.875 |
% Hydrophobic | % Polar |
---|---|
45.86 | 54.14 |
According to VolSite |
HET Code: | 5CA |
---|---|
Formula: | C13H19N7O7S2 |
Molecular weight: | 449.463 g/mol |
DrugBank ID: | DB02684 |
Buried Surface Area: | 50.58 % |
Polar Surface area: | 268.66 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 12 |
H-Bond Donors: | 5 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 1 |
Cationic atoms: | 1 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
19.8425 | 41.4612 | 35.2841 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
N | O | THR- 31 | 2.69 | 151.59 | H-Bond (Ligand Donor) |
CB | CB | ALA- 37 | 4.1 | 0 | Hydrophobic |
SG | CG2 | ILE- 48 | 3.57 | 0 | Hydrophobic |
O1S | N | SER- 51 | 3.31 | 121.09 | H-Bond (Protein Donor) |
C4' | CD2 | LEU- 52 | 3.7 | 0 | Hydrophobic |
C1' | CD2 | LEU- 52 | 4.35 | 0 | Hydrophobic |
C1' | CD1 | ILE- 100 | 4.4 | 0 | Hydrophobic |
N | O | GLY- 101 | 2.78 | 155.22 | H-Bond (Ligand Donor) |
SG | CB | ALA- 129 | 3.87 | 0 | Hydrophobic |
SG | CD2 | LEU- 136 | 3.88 | 0 | Hydrophobic |
O1S | O | HOH- 218 | 2.58 | 121.24 | H-Bond (Protein Donor) |