1.640 Å
X-ray
2007-05-07
| Name: | Uncharacterized protein |
|---|---|
| ID: | Q5SHN1_THET8 |
| AC: | Q5SHN1 |
| Organism: | Thermus thermophilus |
| Reign: | Bacteria |
| TaxID: | 300852 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 9.781 |
|---|---|
| Number of residues: | 36 |
| Including | |
| Standard Amino Acids: | 33 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 3 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.306 | 448.875 |
| % Hydrophobic | % Polar |
|---|---|
| 45.86 | 54.14 |
| According to VolSite | |

| HET Code: | 5CA |
|---|---|
| Formula: | C13H19N7O7S2 |
| Molecular weight: | 449.463 g/mol |
| DrugBank ID: | DB02684 |
| Buried Surface Area: | 50.58 % |
| Polar Surface area: | 268.66 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 12 |
| H-Bond Donors: | 5 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 1 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 7 |
| X | Y | Z |
|---|---|---|
| 19.8425 | 41.4612 | 35.2841 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| N | O | THR- 31 | 2.69 | 151.59 | H-Bond (Ligand Donor) |
| CB | CB | ALA- 37 | 4.1 | 0 | Hydrophobic |
| SG | CG2 | ILE- 48 | 3.57 | 0 | Hydrophobic |
| O1S | N | SER- 51 | 3.31 | 121.09 | H-Bond (Protein Donor) |
| C4' | CD2 | LEU- 52 | 3.7 | 0 | Hydrophobic |
| C1' | CD2 | LEU- 52 | 4.35 | 0 | Hydrophobic |
| C1' | CD1 | ILE- 100 | 4.4 | 0 | Hydrophobic |
| N | O | GLY- 101 | 2.78 | 155.22 | H-Bond (Ligand Donor) |
| SG | CB | ALA- 129 | 3.87 | 0 | Hydrophobic |
| SG | CD2 | LEU- 136 | 3.88 | 0 | Hydrophobic |
| O1S | O | HOH- 218 | 2.58 | 121.24 | H-Bond (Protein Donor) |