2.370 Å
X-ray
2011-01-25
Name: | TetX family tetracycline inactivation enzyme |
---|---|
ID: | Q93L51_BACT4 |
AC: | Q93L51 |
Organism: | Bacteroides thetaiotaomicron |
Reign: | Bacteria |
TaxID: | 818 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
D | 100 % |
B-Factor: | 55.342 |
---|---|
Number of residues: | 32 |
Including | |
Standard Amino Acids: | 31 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | FAD |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.034 | 1117.125 |
% Hydrophobic | % Polar |
---|---|
45.92 | 54.08 |
According to VolSite |
HET Code: | I7T |
---|---|
Formula: | C21H19IN2O7 |
Molecular weight: | 538.289 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 57.83 % |
Polar Surface area: | 171.08 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 7 |
H-Bond Donors: | 3 |
Rings: | 4 |
Aromatic rings: | 1 |
Anionic atoms: | 3 |
Cationic atoms: | 1 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
0.937258 | -32.7159 | 14.4845 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O3 | NE2 | GLN- 192 | 3.32 | 171.9 | H-Bond (Protein Donor) |
C6 | CE | MET- 215 | 3.95 | 0 | Hydrophobic |
C61 | CE | MET- 215 | 4.18 | 0 | Hydrophobic |
C5 | CD2 | PHE- 224 | 3.51 | 0 | Hydrophobic |
C41 | CG | PHE- 224 | 4.41 | 0 | Hydrophobic |
C6 | CE2 | PHE- 224 | 3.81 | 0 | Hydrophobic |
I7 | SD | MET- 375 | 3.71 | 0 | Hydrophobic |
I7 | CE1 | PHE- 382 | 4.05 | 0 | Hydrophobic |
O1C | O4 | FAD- 1384 | 3.13 | 173.49 | H-Bond (Ligand Donor) |