1.550 Å
X-ray
2010-05-20
Name: | Uncharacterized protein |
---|---|
ID: | Q8KRB7_STRCL |
AC: | Q8KRB7 |
Organism: | Streptomyces clavuligerus |
Reign: | Bacteria |
TaxID: | 1901 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 11.978 |
---|---|
Number of residues: | 22 |
Including | |
Standard Amino Acids: | 22 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.002 | 570.375 |
% Hydrophobic | % Polar |
---|---|
52.07 | 47.93 |
According to VolSite |
HET Code: | J01 |
---|---|
Formula: | C8H8NO5 |
Molecular weight: | 198.153 g/mol |
DrugBank ID: | DB00766 |
Buried Surface Area: | 49.04 % |
Polar Surface area: | 89.9 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 0 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
6.75033 | 5.68575 | 74.9795 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C4 | CE3 | TRP- 91 | 3.62 | 0 | Hydrophobic |
C7 | CG2 | VAL- 93 | 4.3 | 0 | Hydrophobic |
C7 | CD1 | ILE- 103 | 3.99 | 0 | Hydrophobic |
C4 | CD2 | LEU- 362 | 4.48 | 0 | Hydrophobic |
C4 | CD1 | LEU- 415 | 3.98 | 0 | Hydrophobic |
C7 | CD2 | LEU- 415 | 4.46 | 0 | Hydrophobic |
C4 | CD | ARG- 418 | 4.02 | 0 | Hydrophobic |
O5 | NZ | LYS- 423 | 3.91 | 0 | Ionic (Protein Cationic) |