1.550 Å
X-ray
2010-05-20
| Name: | Uncharacterized protein |
|---|---|
| ID: | Q8KRB7_STRCL |
| AC: | Q8KRB7 |
| Organism: | Streptomyces clavuligerus |
| Reign: | Bacteria |
| TaxID: | 1901 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 11.978 |
|---|---|
| Number of residues: | 22 |
| Including | |
| Standard Amino Acids: | 22 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.002 | 570.375 |
| % Hydrophobic | % Polar |
|---|---|
| 52.07 | 47.93 |
| According to VolSite | |

| HET Code: | J01 |
|---|---|
| Formula: | C8H8NO5 |
| Molecular weight: | 198.153 g/mol |
| DrugBank ID: | DB00766 |
| Buried Surface Area: | 49.04 % |
| Polar Surface area: | 89.9 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 5 |
| H-Bond Donors: | 1 |
| Rings: | 2 |
| Aromatic rings: | 0 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 6.75033 | 5.68575 | 74.9795 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C4 | CE3 | TRP- 91 | 3.62 | 0 | Hydrophobic |
| C7 | CG2 | VAL- 93 | 4.3 | 0 | Hydrophobic |
| C7 | CD1 | ILE- 103 | 3.99 | 0 | Hydrophobic |
| C4 | CD2 | LEU- 362 | 4.48 | 0 | Hydrophobic |
| C4 | CD1 | LEU- 415 | 3.98 | 0 | Hydrophobic |
| C7 | CD2 | LEU- 415 | 4.46 | 0 | Hydrophobic |
| C4 | CD | ARG- 418 | 4.02 | 0 | Hydrophobic |
| O5 | NZ | LYS- 423 | 3.91 | 0 | Ionic (Protein Cationic) |