2.200 Å
X-ray
2010-04-23
| Name: | Cytosolic heat shock protein 90 |
|---|---|
| ID: | Q7XJ80_HORVU |
| AC: | Q7XJ80 |
| Organism: | Hordeum vulgare |
| Reign: | Eukaryota |
| TaxID: | 4513 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 94 % |
| E | 6 % |
| B-Factor: | 26.363 |
|---|---|
| Number of residues: | 36 |
| Including | |
| Standard Amino Acids: | 34 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | MG |
| Ligandability | Volume (Å3) |
|---|---|
| 0.248 | 614.250 |
| % Hydrophobic | % Polar |
|---|---|
| 35.16 | 64.84 |
| According to VolSite | |

| HET Code: | ADP |
|---|---|
| Formula: | C10H12N5O10P2 |
| Molecular weight: | 424.177 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 61.63 % |
| Polar Surface area: | 260.7 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 14 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 3 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| -32.0036 | -39.2732 | 156.942 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O1A | ND2 | ASN- 39 | 2.83 | 140.33 | H-Bond (Protein Donor) |
| N6 | OD2 | ASP- 81 | 2.98 | 158.23 | H-Bond (Ligand Donor) |
| C1' | CE | MET- 86 | 3.58 | 0 | Hydrophobic |
| C4' | CB | ASN- 94 | 3.96 | 0 | Hydrophobic |
| C1' | CB | ASN- 94 | 4.38 | 0 | Hydrophobic |
| C5' | CD2 | LEU- 95 | 4.38 | 0 | Hydrophobic |
| O1A | N | PHE- 126 | 3.08 | 123.15 | H-Bond (Protein Donor) |
| O2A | N | PHE- 126 | 3.12 | 161.81 | H-Bond (Protein Donor) |
| O2B | NE2 | HIS- 188 | 2.69 | 154.5 | H-Bond (Protein Donor) |
| O3B | MG | MG- 1212 | 2.34 | 0 | Metal Acceptor |
| O1A | MG | MG- 1212 | 2.35 | 0 | Metal Acceptor |
| N1 | O | HOH- 2031 | 2.79 | 179.94 | H-Bond (Protein Donor) |