3.000 Å
X-ray
2009-09-15
Name: | Serine/threonine-protein kinase Chk2 |
---|---|
ID: | CHK2_HUMAN |
AC: | O96017 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.11.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 80.129 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.944 | 509.625 |
% Hydrophobic | % Polar |
---|---|
54.30 | 45.70 |
According to VolSite |
HET Code: | VGM |
---|---|
Formula: | C19H17N3O3 |
Molecular weight: | 335.357 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 52.27 % |
Polar Surface area: | 111.46 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
-9.30012 | 48.9015 | 8.0382 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C03 | CD2 | LEU- 226 | 4.42 | 0 | Hydrophobic |
C06 | CD1 | LEU- 226 | 4.26 | 0 | Hydrophobic |
C22 | CB | LEU- 226 | 3.85 | 0 | Hydrophobic |
C21 | CG1 | VAL- 234 | 4.22 | 0 | Hydrophobic |
C20 | CG2 | VAL- 234 | 3.93 | 0 | Hydrophobic |
O18 | NZ | LYS- 249 | 3.03 | 132.52 | H-Bond (Protein Donor) |
C19 | CD1 | LEU- 301 | 3.51 | 0 | Hydrophobic |
N10 | O | GLU- 302 | 3.16 | 149.85 | H-Bond (Ligand Donor) |
N08 | N | MET- 304 | 2.86 | 145.44 | H-Bond (Protein Donor) |
C13 | CD2 | LEU- 354 | 3.54 | 0 | Hydrophobic |
C21 | CD2 | LEU- 354 | 4.33 | 0 | Hydrophobic |
C14 | CD1 | LEU- 354 | 4.24 | 0 | Hydrophobic |
C12 | CD1 | LEU- 354 | 3.63 | 0 | Hydrophobic |
C14 | CG2 | THR- 367 | 3.87 | 0 | Hydrophobic |