1.850 Å
X-ray
2009-06-29
Name: | NmrA-like family domain-containing protein 1 |
---|---|
ID: | NMRL1_HUMAN |
AC: | Q9HBL8 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 13.329 |
---|---|
Number of residues: | 22 |
Including | |
Standard Amino Acids: | 20 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | NAP |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.376 | 300.375 |
% Hydrophobic | % Polar |
---|---|
60.67 | 39.33 |
According to VolSite |
HET Code: | NFL |
---|---|
Formula: | C13H8F3N2O2 |
Molecular weight: | 281.210 g/mol |
DrugBank ID: | DB04552 |
Buried Surface Area: | 66.38 % |
Polar Surface area: | 65.05 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
71.6818 | 16.7576 | 86.5134 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C15 | CH2 | TRP- 82 | 3.88 | 0 | Hydrophobic |
F1 | CE2 | TRP- 82 | 3.23 | 0 | Hydrophobic |
F2 | CZ3 | TRP- 82 | 3.27 | 0 | Hydrophobic |
C10 | CZ2 | TRP- 82 | 3.21 | 0 | Hydrophobic |
O7 | NE1 | TRP- 82 | 2.55 | 164.43 | H-Bond (Protein Donor) |
C13 | CB | HIS- 162 | 3.87 | 0 | Hydrophobic |
F2 | CD1 | LEU- 257 | 4.12 | 0 | Hydrophobic |
C14 | CD1 | LEU- 257 | 4.03 | 0 | Hydrophobic |
C12 | CD2 | LEU- 257 | 3.9 | 0 | Hydrophobic |
C12 | CE | MET- 260 | 4.47 | 0 | Hydrophobic |
C4 | SD | MET- 260 | 3.45 | 0 | Hydrophobic |