1.870 Å
X-ray
2008-12-18
| Name: | Biotin carboxylase |
|---|---|
| ID: | ACCC_ECOLI |
| AC: | P24182 |
| Organism: | Escherichia coli |
| Reign: | Bacteria |
| TaxID: | 83333 |
| EC Number: | 6.3.4.14 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 21.114 |
|---|---|
| Number of residues: | 35 |
| Including | |
| Standard Amino Acids: | 31 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 4 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.017 | 1211.625 |
| % Hydrophobic | % Polar |
|---|---|
| 39.55 | 60.45 |
| According to VolSite | |

| HET Code: | OA2 |
|---|---|
| Formula: | C18H17N3O2 |
| Molecular weight: | 307.346 g/mol |
| DrugBank ID: | DB08315 |
| Buried Surface Area: | 62.44 % |
| Polar Surface area: | 72.36 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 3 |
| H-Bond Donors: | 1 |
| Rings: | 3 |
| Aromatic rings: | 3 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 5 |
| X | Y | Z |
|---|---|---|
| 3.39096 | -22.1291 | 23.9202 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C19 | CD1 | ILE- 157 | 3.51 | 0 | Hydrophobic |
| O2 | NZ | LYS- 159 | 2.85 | 155.03 | H-Bond (Protein Donor) |
| C19 | SD | MET- 169 | 3.84 | 0 | Hydrophobic |
| C21 | CG2 | VAL- 171 | 3.96 | 0 | Hydrophobic |
| N8 | OE2 | GLU- 201 | 2.87 | 162.88 | H-Bond (Ligand Donor) |
| N8 | O | LYS- 202 | 2.78 | 159.89 | H-Bond (Ligand Donor) |
| N7 | N | LEU- 204 | 3.01 | 176.33 | H-Bond (Protein Donor) |
| C15 | CB | HIS- 209 | 4.1 | 0 | Hydrophobic |
| C14 | CG | GLN- 233 | 4.41 | 0 | Hydrophobic |
| C12 | CD2 | LEU- 278 | 3.94 | 0 | Hydrophobic |
| C17 | CG2 | ILE- 437 | 3.92 | 0 | Hydrophobic |
| C20 | CD1 | ILE- 437 | 4.1 | 0 | Hydrophobic |
| C12 | CD1 | ILE- 437 | 4.25 | 0 | Hydrophobic |