2.500 Å
X-ray
2007-07-27
Name: | Tyrosine-protein kinase ABL1 |
---|---|
ID: | ABL1_HUMAN |
AC: | P00519 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.10.2 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 21.373 |
---|---|
Number of residues: | 36 |
Including | |
Standard Amino Acids: | 34 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | |
Metals: | MG |
Ligandability | Volume (Å3) |
---|---|
0.865 | 739.125 |
% Hydrophobic | % Polar |
---|---|
43.38 | 56.62 |
According to VolSite |
HET Code: | 627 |
---|---|
Formula: | C26H31N6O3 |
Molecular weight: | 475.563 g/mol |
DrugBank ID: | DB11778 |
Buried Surface Area: | 52.86 % |
Polar Surface area: | 95 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 3 |
Rings: | 5 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 6 |
X | Y | Z |
---|---|---|
-42.4158 | -50.6965 | -10.8478 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C7 | CD2 | LEU- 248 | 4.07 | 0 | Hydrophobic |
C36 | CG2 | VAL- 256 | 4.47 | 0 | Hydrophobic |
O26 | NZ | LYS- 271 | 3.29 | 128.83 | H-Bond (Protein Donor) |
N2 | O | GLU- 316 | 2.83 | 149.16 | H-Bond (Ligand Donor) |
N4 | N | MET- 318 | 2.89 | 170.65 | H-Bond (Protein Donor) |
N5 | O | MET- 318 | 3.27 | 169.58 | H-Bond (Ligand Donor) |
C31 | CB | ASN- 322 | 4.18 | 0 | Hydrophobic |
C33 | CD2 | LEU- 370 | 3.9 | 0 | Hydrophobic |
C35 | CD1 | LEU- 370 | 3.64 | 0 | Hydrophobic |
C33 | CB | ALA- 380 | 3.98 | 0 | Hydrophobic |
C29 | CB | ASP- 381 | 4.16 | 0 | Hydrophobic |