2.400 Å
X-ray
2007-04-24
| Name: | Primary amine oxidase, liver isozyme |
|---|---|
| ID: | AOCX_BOVIN |
| AC: | Q29437 |
| Organism: | Bos taurus |
| Reign: | Eukaryota |
| TaxID: | 9913 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 25.410 |
|---|---|
| Number of residues: | 26 |
| Including | |
| Standard Amino Acids: | 23 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | CU |
| Ligandability | Volume (Å3) |
|---|---|
| 1.298 | 965.250 |
| % Hydrophobic | % Polar |
|---|---|
| 53.50 | 46.50 |
| According to VolSite | |

| HET Code: | CLU |
|---|---|
| Formula: | C9H10Cl2N3 |
| Molecular weight: | 231.102 g/mol |
| DrugBank ID: | DB00575 |
| Buried Surface Area: | 71.42 % |
| Polar Surface area: | 38.03 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 0 |
| H-Bond Donors: | 3 |
| Rings: | 2 |
| Aromatic rings: | 1 |
| Anionic atoms: | 0 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 1 |
| X | Y | Z |
|---|---|---|
| 35.2397 | -10.8446 | 42.2997 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CL2 | CB | ALA- 369 | 3.47 | 0 | Hydrophobic |
| CAF | CE2 | TYR- 383 | 3.67 | 0 | Hydrophobic |
| NAJ | OD2 | ASP- 385 | 2.97 | 157.53 | H-Bond (Ligand Donor) |
| NAH | OD1 | ASP- 385 | 2.88 | 136.35 | H-Bond (Ligand Donor) |
| CAF | CE1 | PHE- 388 | 4.44 | 0 | Hydrophobic |
| CL1 | CG | MET- 467 | 3.54 | 0 | Hydrophobic |
| CAF | SD | MET- 467 | 4 | 0 | Hydrophobic |
| CL1 | CE1 | TYR- 472 | 3.73 | 0 | Hydrophobic |
| CL2 | CZ | TYR- 472 | 4.39 | 0 | Hydrophobic |
| DuAr | DuAr | TYR- 472 | 3.6 | 0 | Aromatic Face/Face |