2.400 Å
X-ray
2007-04-24
Name: | Primary amine oxidase, liver isozyme |
---|---|
ID: | AOCX_BOVIN |
AC: | Q29437 |
Organism: | Bos taurus |
Reign: | Eukaryota |
TaxID: | 9913 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 25.410 |
---|---|
Number of residues: | 26 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 2 |
Water Molecules: | 1 |
Cofactors: | |
Metals: | CU |
Ligandability | Volume (Å3) |
---|---|
1.298 | 965.250 |
% Hydrophobic | % Polar |
---|---|
53.50 | 46.50 |
According to VolSite |
HET Code: | CLU |
---|---|
Formula: | C9H10Cl2N3 |
Molecular weight: | 231.102 g/mol |
DrugBank ID: | DB00575 |
Buried Surface Area: | 71.42 % |
Polar Surface area: | 38.03 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 0 |
H-Bond Donors: | 3 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
35.2397 | -10.8446 | 42.2997 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CL2 | CB | ALA- 369 | 3.47 | 0 | Hydrophobic |
CAF | CE2 | TYR- 383 | 3.67 | 0 | Hydrophobic |
NAJ | OD2 | ASP- 385 | 2.97 | 157.53 | H-Bond (Ligand Donor) |
NAH | OD1 | ASP- 385 | 2.88 | 136.35 | H-Bond (Ligand Donor) |
CAF | CE1 | PHE- 388 | 4.44 | 0 | Hydrophobic |
CL1 | CG | MET- 467 | 3.54 | 0 | Hydrophobic |
CAF | SD | MET- 467 | 4 | 0 | Hydrophobic |
CL1 | CE1 | TYR- 472 | 3.73 | 0 | Hydrophobic |
CL2 | CZ | TYR- 472 | 4.39 | 0 | Hydrophobic |
DuAr | DuAr | TYR- 472 | 3.6 | 0 | Aromatic Face/Face |