2.900 Å
X-ray
2007-04-23
Name: | Protein kinase 7 |
---|---|
ID: | Q7YTF7_PLAF7 |
AC: | Q7YTF7 |
Organism: | Plasmodium falciparum |
Reign: | Eukaryota |
TaxID: | 36329 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
X | 100 % |
B-Factor: | 32.062 |
---|---|
Number of residues: | 24 |
Including | |
Standard Amino Acids: | 24 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.847 | 732.375 |
% Hydrophobic | % Polar |
---|---|
49.77 | 50.23 |
According to VolSite |
HET Code: | HMD |
---|---|
Formula: | C11H11BrN5O2 |
Molecular weight: | 325.141 g/mol |
DrugBank ID: | DB02950 |
Buried Surface Area: | 67.24 % |
Polar Surface area: | 110.88 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 0 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
-11.8247 | -33.6469 | -18.0192 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
BR1 | CB | LEU- 34 | 4.4 | 0 | Hydrophobic |
C7 | CG2 | ILE- 42 | 3.85 | 0 | Hydrophobic |
C7 | CB | ALA- 53 | 4 | 0 | Hydrophobic |
C7 | CD2 | LEU- 101 | 3.77 | 0 | Hydrophobic |
C7 | CD1 | TYR- 117 | 3.83 | 0 | Hydrophobic |
N2 | O | GLU- 118 | 2.96 | 174.99 | H-Bond (Ligand Donor) |
O1 | N | MET- 120 | 2.73 | 166.91 | H-Bond (Protein Donor) |
BR1 | CB | ASP- 123 | 3.76 | 0 | Hydrophobic |
C7 | CD1 | LEU- 179 | 4.44 | 0 | Hydrophobic |
N5 | OD2 | ASP- 190 | 2.99 | 163.9 | H-Bond (Ligand Donor) |