2.830 Å
X-ray
2006-06-29
| Name: | Azurin |
|---|---|
| ID: | AZUR_PSEAE |
| AC: | P00282 |
| Organism: | Pseudomonas aeruginosa |
| Reign: | Bacteria |
| TaxID: | 208964 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 50 % |
| J | 50 % |
| B-Factor: | 30.651 |
|---|---|
| Number of residues: | 34 |
| Including | |
| Standard Amino Acids: | 32 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | ZN ZN |
| Ligandability | Volume (Å3) |
|---|---|
| 1.355 | 705.375 |
| % Hydrophobic | % Polar |
|---|---|
| 53.11 | 46.89 |
| According to VolSite | |

| HET Code: | 2IH |
|---|---|
| Formula: | C12H18N4 |
| Molecular weight: | 218.298 g/mol |
| DrugBank ID: | DB06968 |
| Buried Surface Area: | 82.25 % |
| Polar Surface area: | 35.64 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 2 |
| H-Bond Donors: | 0 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 7 |
| X | Y | Z |
|---|---|---|
| -12.8289 | -10.4584 | -0.311938 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C10 | SD | MET- 13 | 3.82 | 0 | Hydrophobic |
| C11 | CG | MET- 13 | 4.32 | 0 | Hydrophobic |
| C6 | SD | MET- 13 | 3.91 | 0 | Hydrophobic |
| C11 | SD | MET- 44 | 3.49 | 0 | Hydrophobic |
| C7 | CE | MET- 44 | 3.67 | 0 | Hydrophobic |
| C9 | CE | MET- 44 | 3.91 | 0 | Hydrophobic |
| C6 | CD1 | PHE- 114 | 3.8 | 0 | Hydrophobic |
| C11 | CD1 | PHE- 114 | 3.56 | 0 | Hydrophobic |
| C7 | CE1 | PHE- 114 | 4.18 | 0 | Hydrophobic |
| N4 | ZN | ZN- 1129 | 2.08 | 0 | Metal Acceptor |
| N15 | ZN | ZN- 1129 | 2.06 | 0 | Metal Acceptor |
| DuAr | ZN | ZN- 1129 | 2.96 | 108.55 | Pi/Cation |
| DuAr | ZN | ZN- 1129 | 3.07 | 92.88 | Pi/Cation |