2.900 Å
X-ray
2006-06-07
| Name: | DNA translocase FtsK |
|---|---|
| ID: | FTSK_PSEAE |
| AC: | Q9I0M3 |
| Organism: | Pseudomonas aeruginosa |
| Reign: | Bacteria |
| TaxID: | 208964 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| E | 100 % |
| B-Factor: | 69.423 |
|---|---|
| Number of residues: | 25 |
| Including | |
| Standard Amino Acids: | 25 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.346 | 290.250 |
| % Hydrophobic | % Polar |
|---|---|
| 58.14 | 41.86 |
| According to VolSite | |

| HET Code: | ADP |
|---|---|
| Formula: | C10H12N5O10P2 |
| Molecular weight: | 424.177 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 53.18 % |
| Polar Surface area: | 260.7 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 14 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 3 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| -15.6754 | 44.2271 | -7.18674 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O1B | N | GLY- 469 | 2.59 | 163.85 | H-Bond (Protein Donor) |
| O2B | N | GLY- 471 | 3.37 | 141.77 | H-Bond (Protein Donor) |
| O3A | N | GLY- 471 | 3.34 | 129.33 | H-Bond (Protein Donor) |
| O2B | N | LYS- 472 | 3.1 | 147.88 | H-Bond (Protein Donor) |
| O1A | N | VAL- 474 | 2.88 | 161.42 | H-Bond (Protein Donor) |
| O4' | ND1 | HIS- 675 | 2.98 | 139.3 | H-Bond (Protein Donor) |
| N6 | O | GLY- 693 | 2.64 | 144.53 | H-Bond (Ligand Donor) |
| C2' | CE1 | PHE- 695 | 3.66 | 0 | Hydrophobic |