2.900 Å
X-ray
2006-06-07
Name: | DNA translocase FtsK |
---|---|
ID: | FTSK_PSEAE |
AC: | Q9I0M3 |
Organism: | Pseudomonas aeruginosa |
Reign: | Bacteria |
TaxID: | 208964 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
E | 100 % |
B-Factor: | 69.423 |
---|---|
Number of residues: | 25 |
Including | |
Standard Amino Acids: | 25 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.346 | 290.250 |
% Hydrophobic | % Polar |
---|---|
58.14 | 41.86 |
According to VolSite |
HET Code: | ADP |
---|---|
Formula: | C10H12N5O10P2 |
Molecular weight: | 424.177 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 53.18 % |
Polar Surface area: | 260.7 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 14 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 3 |
Cationic atoms: | 0 |
Rule of Five Violation: | 1 |
Rotatable Bonds: | 6 |
X | Y | Z |
---|---|---|
-15.6754 | 44.2271 | -7.18674 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O1B | N | GLY- 469 | 2.59 | 163.85 | H-Bond (Protein Donor) |
O2B | N | GLY- 471 | 3.37 | 141.77 | H-Bond (Protein Donor) |
O3A | N | GLY- 471 | 3.34 | 129.33 | H-Bond (Protein Donor) |
O2B | N | LYS- 472 | 3.1 | 147.88 | H-Bond (Protein Donor) |
O1A | N | VAL- 474 | 2.88 | 161.42 | H-Bond (Protein Donor) |
O4' | ND1 | HIS- 675 | 2.98 | 139.3 | H-Bond (Protein Donor) |
N6 | O | GLY- 693 | 2.64 | 144.53 | H-Bond (Ligand Donor) |
C2' | CE1 | PHE- 695 | 3.66 | 0 | Hydrophobic |